Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015847219.1_cds_XP_016509967.1_22856
CDS Infomation

[gene=LOC107827366] [db_xref=GeneID:107827366] [protein=calcium-dependent protein kinase 1-like] [protein_id=XP_016509967.1] [location=join(72340..73153,73534..73677,73877..74029,74284..74399,74494..74661,75992..76216,76609..76734)] [gbkey=CDS]
Sequence

ATGGGGAACACTTGTGTTGGACCAAGTATTTCTAAAAATGGTATCTTTCAGTCAGTTTCA
GCTGCAATGTGGCGAACTCGGGTGCCAGATGATTCTGGTTCCACCACTAATGATGATAGT
GCCAGAGGTGAAACAGCAGAATCTGGAAAGGACCCTGATTTGGTTGTCCAAAGTAAGCCA
CCAGAACAGATAACAATGCCCAAGTCTGAGCAGAAGGAAGAGGAACTGGCGAAAAAGGAA
GAGGGACCGGAAAAGCCTAAGAAGCCGGTACAGATGAAGAGGGTAGGTAGTGCAGGCCTT
AGGATTGATTCTGTATTACAGAAGAAAACTGGCAGCTTAAAGGAGTTTTTCAGTATAGGA
AAGAAATTAGGACAAGGACAATTCGGAACTACGTTTAAATGTGTCGAAAAGGCAACAGGG
AAGGAGTACGCATGCAAATCGATTGCTAAGAGGAAATTGTTGACAGATGATGATGTGGAA
GATGTTAGAAGGGAAATTCAGATAATGCACCACTTGGCGGGGCATCCAAATGTTATATCG
ATAAAAGGGGCTTATGAGGATGCTGTCGCTGTTCATGTCGTTATGGAATATTGTGCTGGA
GGTGAGCTTTTCGATAGGATTATTCAGCGCGGGCACTATACAGAAAGAAAAGCAGCTGAG
CTCACCAGGACTATTGTTGGAGTTCTAGAAGCTTGTCATTCTCTGGGCGTCATGCATCGT
GATCTTAAGCCTGAAAATTTTCTTTTTGTTAATCAGAAGGAGGATTCACTACTCAAAACA
ATTGACTTTGGATTGTCAATTTTCTTCAAACCAGGTGACAGATTTAATGATGTTGTTGGC
AGTCCTTACTATGTTGCACCAGAAGTTCTCAAAAAACGCTATGGTCCCGAAGCTGATGTT
TGGAGTGCTGGTGTGATTGTGTACATTTTATTAAGTGGAGTACCTCCTTTCTGGGCTGAA
AATGAACAAGGAATATTCGAAGAAGTCCTACATGGTGATCTCGACTTCTCATCAGATCCA
TGGCCTAGTATTTCAGAAGATGCAAAAGACTTAGTCAGGAGAATGCTTGTTCGAGATCCC
AAAAAACGTTTAACTGCTCATGAAGTCTTGTGCCATCGTTGGGTTCAAGTTGATGGTGTG
GCTCCAGATAAGCCTCTGGATTCTGCAGTTCTGAGTCGAATGAAACAATTTTCTGCAATG
AACAAGCTCAAGAAAATGGCTTTGAGAGTCATCGCCGAAAGCCTATCTGAAGAAGAAATT
GCTGGTCTGAAAGAAATGTTCAGGATGATAGATACAGACAATAGTGGTCAAATAACCTTT
GAGGAGCTCAAAGTTGGATTAAAAAGAGTTGGCGCTAATCTCAAGGAGTCCGAGATCTAT
GATCTTATGCAGGCAGCAGATGTTGATAACAGCGGCACAATTGATTATGGGGAATTTATA
GCGGCAACATTACATTTTAACAAAATTGAAAGAGAAGATCATCTATTTGCTGCTTTCTCT
TACTTTGATAAAGATGGCAGTGGCTACATTACTGCAGACGAGCTTCAACAAGCTTGTGAG
GAATTTGGCATTGGGGACGTCCATCTGGAAGATATGATAAGAGATGCCGATCAGGACAAT
GATGGACGAATTGATTACAATGAGTTCGTTGCTATGATGCAAAAGGGAAATCCAGTGATT
GGCGGTGGCAAGAAAGGTCTAGAACACAGTTTCAGCACCGGATTTAGAGAGGCTCTAAGA
CTTTAG

Peptide Sequence

PEP ID

XP_016509967.1
PEP Infomation

PREDICTED: calcium-dependent protein kinase 1-like [Nicotiana tabacum]
Sequence

MGNTCVGPSISKNGIFQSVSAAMWRTRVPDDSGSTTNDDSARGETAESGKDPDLVVQSKP
PEQITMPKSEQKEEELAKKEEGPEKPKKPVQMKRVGSAGLRIDSVLQKKTGSLKEFFSIG
KKLGQGQFGTTFKCVEKATGKEYACKSIAKRKLLTDDDVEDVRREIQIMHHLAGHPNVIS
IKGAYEDAVAVHVVMEYCAGGELFDRIIQRGHYTERKAAELTRTIVGVLEACHSLGVMHR
DLKPENFLFVNQKEDSLLKTIDFGLSIFFKPGDRFNDVVGSPYYVAPEVLKKRYGPEADV
WSAGVIVYILLSGVPPFWAENEQGIFEEVLHGDLDFSSDPWPSISEDAKDLVRRMLVRDP
KKRLTAHEVLCHRWVQVDGVAPDKPLDSAVLSRMKQFSAMNKLKKMALRVIAESLSEEEI
AGLKEMFRMIDTDNSGQITFEELKVGLKRVGANLKESEIYDLMQAADVDNSGTIDYGEFI
AATLHFNKIEREDHLFAAFSYFDKDGSGYITADELQQACEEFGIGDVHLEDMIRDADQDN
DGRIDYNEFVAMMQKGNPVIGGGKKGLEHSFSTGFREALRL

Transcript Sequence

Gene sequence data has not been registered.